Protein Synthesis (According to George)
“My name is George, I am a protein, and I work in
one of the waste disposal plants in my home cell. Actually the last time that I was out of the plant was when I was
brought here a long time ago to begin my career in waste disposal. I am now
reaching the end and will retire shortly as soon as my replacement
arrives. It has been a good job and I
have enjoyed working side by side with other workers who are exactly like me. At least they were like me when I began, but
parts of me have been wearing out. Our
job is to tear apart industrial waste so an acid bath can dissolve it more
quickly. This requires strength, which
is what I have, in spite of my roly-poly shape. In watching my fellow workers
over my career, I have come to the conclusion that we have the perfect shape
for our job. The bosses must think so
also because whenever a replacement comes, he is just like us when we
began. No new improved versions among
them. So I figure the reason for that
is you can’t beat perfection.
“Being quite an observant fellow, I have noticed
that my fellow workers and I are made of twenty kinds of pieces that are joined
like links on a chain. I have counted
482 but since our shape, as I already mentioned, is roly-poly, some of the
links are hidden inside and cannot be counted. I vaguely remember a time when I was long and sleek, before my
500 or more pieces were folded into my present shape. With the help of my memory, poor as it is, and questioning my
bosses and recently-arrived workers, I have figured out how we were made. If
you have a few minutes, I would like to tell you.”
The Cell Library (The Nucleus Containing the DNA)
“First I learned that my cell has a library that
contains the instructions for making me, all the other proteins in my plant as
well as the proteins everywhere else in my cell. (This cell is quite a
place.) I prefer to call the
instructions for making me a recipe although I have heard it called a gene and
sometimes they use three letters like NDA or AND or DNA. I have also learned that the head librarian
is not to be fooled with, and she has strict rules about not letting the
original recipes out of the library.
However, she or someone else has figured out a clever copying process so
that copies of the recipes can be taken out of the library to where ever they
need to go.”
Protein Synthesis (According to Microbiology)
Before we get back to George’s training in waste
disposal and his description of the trip that brought him to his plant, the
first part of George’s tale needs to be translated into the terminology of
protein synthesis in cells.
First George is a globular protein, more
specifically a digestive enzyme that resides inside of lysosomes. George correctly surmises that he is a chain
of twenty kinds of links, which are the twenty amino acid residues that form
all proteins. The original recipes kept in the library are the genes on the
double helix strands of DNA in the cell’s nucleus. George is aware that DNA is made of four kinds of links which are
not amino acids and are called nucleotides.
The copy of the recipe, which is called the messenger, is the messenger
RNA or m-RNA for short. It leaves the
nucleus and goes to a ribosome, or griddle as George describes it. The ribosome
assembles the chain of amino acids which are brought to it by the “L-shaped
guys” which are the transfer RNA’s or t-RNA for short. George has not figured
out how each of the twenty amino acids are designated by the four nucleotides
of DNA and RNA, but he correctly surmises that triplets of these are important.